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MGC80700 MGC80700 protein [ Xenopus laevis (African clawed frog) ]

Gene ID: 444186, updated on 10-Mar-2023

Summary

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Gene symbol
MGC80700
Gene description
MGC80700 protein
Locus tag
XELAEV_18016211mg
See related
EnsemblRapid:ENSXLAG00005022616
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See MGC80700 in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (147634495..147645935, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (138636137..138644205, complement)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene ligand of numb-protein X 2 S homeolog Neighboring gene small nucleolar RNA SNORA27 Neighboring gene RAS like family 11 member A S homeolog Neighboring gene ubiquitin specific peptidase 12 S homeolog Neighboring gene G protein-coupled receptor 12 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
MGC80700 protein; uncharacterized protein LOC444186

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092290.2 → NP_001085759.1  uncharacterized protein LOC444186

    See identical proteins and their annotated locations for NP_001085759.1

    Status: PREDICTED

    Source sequence(s)
    BC073305
    UniProtKB/TrEMBL
    A0A974DLE1, Q6GP41
    Related
    ENSXLAP00005066534.1, ENSXLAT00005068058.1
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    147634495..147645935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041583111.1 → XP_041439045.1  MGC80700 protein isoform X1

    UniProtKB/TrEMBL
    A0A974DLE1, Q6GP41
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

  2. XM_018248261.2 → XP_018103750.1  MGC80700 protein isoform X1

    UniProtKB/TrEMBL
    A0A974DLE1, Q6GP41
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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