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wdr89.L WD repeat domain 89 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444112, updated on 4-Nov-2024

Summary

Official Symbol
wdr89.L
Official Full Name
WD repeat domain 89 L homeolog
Primary source
Xenbase:XB-GENE-1007517
Locus tag
XELAEV_18039782mg
See related
EnsemblRapid:ENSXLAG00005030100 AllianceGenome:Xenbase:XB-GENE-1007517
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
wdr89
Summary
Orthologous to human WDR89 (WD repeat domain 89). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See wdr89.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (92640720..92643301)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (77913573..77916154)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing, nuclear envelope 2 L homeolog Neighboring gene sphingosine-1-phosphate phosphatase 1 L homeolog Neighboring gene uncharacterized LOC121397093 Neighboring gene protein phosphatase 2 regulatory subunit B', epsilon L homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
WD repeat domain 89 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092217.1NP_001085686.1  WD repeat domain 89 L homeolog

    See identical proteins and their annotated locations for NP_001085686.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073195
    UniProtKB/TrEMBL
    Q6GPE4
    Related
    ENSXLAP00005090056.1, ENSXLAT00005091732.1
    Conserved Domains (3) summary
    COG2319
    Location:40348
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:110167
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:39257
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    92640720..92643301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018228890.2XP_018084379.1  WD repeat domain 89 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FA55, A0A974H8E3
    Related
    ENSXLAP00005090007.1, ENSXLAT00005091684.1