shcbp1.S SHC SH2-domain binding protein 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: shcbp1.S
Official Full Name: SHC SH2-domain binding protein 1 S homeolog
Primary source: Xenbase:XB-GENE-6255971
Locus tag: XELAEV_18024971mg
See related: EnsemblRapid:ENSXLAG00005018572 AllianceGenome:Xenbase:XB-GENE-6255971
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: shcbp1; shcbp1-a; shcbp1-b
Summary: Predicted to act upstream of or within fibroblast growth factor receptor signaling pathway and regulation of neural precursor cell proliferation. Predicted to be located in cytoplasm; midbody; and spindle. Orthologous to human SHCBP1 (SHC binding and spindle associated 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 4S

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4S	NC_054378.1 (54749355..54785121, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4S	NC_030731.1 (48654404..48690356, complement)

Chromosome 4S - NC_054378.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within fibroblast growth factor receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within fibroblast growth factor receptor signaling pathway	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within regulation of neural precursor cell proliferation	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in midbody	IEA Inferred from Electronic Annotation more info
located_in spindle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: SHC SH2 domain-binding protein 1 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092212.1 → NP_001085681.1 SHC SH2 domain-binding protein 1 homolog A

See identical proteins and their annotated locations for NP_001085681.1

Status: PROVISIONAL

Source sequence(s)

BC073190

UniProtKB/Swiss-Prot

Q6GPE9

UniProtKB/TrEMBL

A0A974HLW8

Related

ENSXLAP00005054906.1, ENSXLAT00005056094.1

Conserved Domains (1) summary

pfam13229
Location:452 → 562

Beta_helix; Right handed beta helix region

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

54749355..54785121 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)