rdh13.L retinol dehydrogenase 13 (all-trans/9-cis) L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rdh13.L
Official Full Name: retinol dehydrogenase 13 (all-trans/9-cis) L homeolog
Primary source: Xenbase:XB-GENE-965073
Locus tag: XELAEV_18026677mg
See related: EnsemblRapid:ENSXLAG00005017653
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rdh13
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Genomic context

Location:: chromosome: 5L

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (42966810..42977075, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (41803248..41813352, complement)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables all-trans-retinol dehydrogenase (NADP+) activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within retinal metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: retinol dehydrogenase 13 (all-trans/9-cis) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092211.1 → NP_001085680.1 retinol dehydrogenase 13 (all-trans/9-cis) L homeolog

See identical proteins and their annotated locations for NP_001085680.1

Status: PROVISIONAL

Source sequence(s)

BC073189

UniProtKB/TrEMBL

A0A974HJ85, Q6GPF0

Related

ENSXLAP00005052098.1, ENSXLAT00005053262.1

Conserved Domains (2) summary

cd09807
Location:38 → 313

retinol-DH_like_SDR_c; retinol dehydrogenases (retinol-DHs), classical (c) SDRs

PRK06197
Location:37 → 316

PRK06197; short chain dehydrogenase; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

42966810..42977075 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041562186.1 → XP_041418120.1 retinol dehydrogenase 13 (all-trans/9-cis) L homeolog isoform X1

UniProtKB/TrEMBL

A0A8J1KLD7

Conserved Domains (1) summary

cl21454
Location:38 → 254

NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins