hba-l5.L alpha globin larval-5 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: hba-l5.L
Official Full Name: alpha globin larval-5 L homeolog
Primary source: Xenbase:XB-GENE-5912808
Locus tag: XELAEV_18045095mg
See related: AllianceGenome:Xenbase:XB-GENE-5912808
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: hbz; hba-l1
Summary: Predicted to enable several functions, including haptoglobin binding activity; heme binding activity; and oxygen binding activity. Predicted to act upstream of or within hydrogen peroxide catabolic process and oxygen transport. Predicted to be located in blood microparticle. Predicted to be part of haptoglobin-hemoglobin complex and hemoglobin complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (96372744..96378102)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (85795342..85800328)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables haptoglobin binding	IEA Inferred from Electronic Annotation more info
enables heme binding	IEA Inferred from Electronic Annotation more info
enables iron ion binding	IEA Inferred from Electronic Annotation more info
enables organic acid binding	IEA Inferred from Electronic Annotation more info
enables oxygen binding	IEA Inferred from Electronic Annotation more info
enables oxygen carrier activity	IEA Inferred from Electronic Annotation more info
enables peroxidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within hydrogen peroxide catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within oxygen transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in blood microparticle	IEA Inferred from Electronic Annotation more info
part_of haptoglobin-hemoglobin complex	IEA Inferred from Electronic Annotation more info
part_of hemoglobin complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: alpha globin larval-5 L homeolog

Names: hemoglobin subunit zeta-like; hemoglobin, zeta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092169.1 → NP_001085638.1 alpha globin larval-5 L homeolog

See identical proteins and their annotated locations for NP_001085638.1

Status: PROVISIONAL

Source sequence(s)

BC073064

UniProtKB/TrEMBL

A0A974BZX8, Q6GPP8

Conserved Domains (1) summary

cd08927
Location:3 → 139

Hb-alpha_like; Hemoglobin alpha, zeta, mu, theta, and related Hb subunits