poldip3.S polymerase (DNA-directed), delta interacting protein 3 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: poldip3.S
Official Full Name: polymerase (DNA-directed), delta interacting protein 3 S homeolog
Primary source: Xenbase:XB-GENE-952221
Locus tag: XELAEV_18025543mg
See related: EnsemblRapid:ENSXLAG00005006569
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: poldip3
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Genomic context

Location:: chromosome: 4S

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4S	NC_054378.1 (93987472..94012821, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4S	NC_030731.1 (87658590..87684354, complement)

Chromosome 4S - NC_054378.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables mRNA binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within poly(A)+ mRNA export from nucleus	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nuclear speck	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: polymerase (DNA-directed), delta interacting protein 3 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092146.1 → NP_001085615.1 polymerase (DNA-directed), delta interacting protein 3 S homeolog

See identical proteins and their annotated locations for NP_001085615.1

Status: PROVISIONAL

Source sequence(s)

BC073024

UniProtKB/TrEMBL

A0A974D272, Q6GPT4

Related

ENSXLAP00005019525.1, ENSXLAT00005019860.1

Conserved Domains (2) summary

COG0724
Location:266 → 392

RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

cd12681
Location:262 → 330

RRM_SKAR; RNA recognition motif in S6K1 Aly/REF-like target (SKAR) and similar proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

93987472..94012821 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)