gga1.S golgi-associated, gamma adaptin ear containing, ARF binding protein 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: gga1.S
Official Full Name: golgi-associated, gamma adaptin ear containing, ARF binding protein 1 S homeolog
Primary source: Xenbase:XB-GENE-984820
Locus tag: XELAEV_18025713mg
See related: EnsemblRapid:ENSXLAG00005017363 AllianceGenome:Xenbase:XB-GENE-984820
Gene type: protein coding
RefSeq status: MODEL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: gga1
Summary: Predicted to enable phosphatidylinositol binding activity; small GTPase binding activity; and ubiquitin binding activity. Predicted to act upstream of or within Golgi to plasma membrane transport; intracellular protein transport; and protein localization to cell surface. Predicted to be located in early endosome membrane and trans-Golgi network. Orthologous to human GGA1 (golgi associated, gamma adaptin ear containing, ARF binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
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Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4S	NC_054378.1 (102011273..102040998, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4S	NC_030731.1 (95676923..95706714, complement)

Chromosome 4S - NC_054378.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables phosphatidylinositol binding	IEA Inferred from Electronic Annotation more info
enables small GTPase binding	IEA Inferred from Electronic Annotation more info
enables ubiquitin binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within Golgi to plasma membrane transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within intracellular protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein localization to cell surface	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within vesicle-mediated transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info
located_in early endosome membrane	IEA Inferred from Electronic Annotation more info
located_in trans-Golgi network	IEA Inferred from Electronic Annotation more info

Preferred Names: ADP-ribosylation factor-binding protein GGA1; golgi-associated, gamma adaptin ear containing, ARF binding protein 1 S homeolog

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The following sections contain reference sequences that belong to a specific genome build. Explain

The following Reference Sequences have been suppressed. Explain

NM_001092131.1: Suppressed sequence

Description

NM_001092131.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.