sumo2.S small ubiquitin-like modifier 2 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: sumo2.S
Official Full Name: small ubiquitin-like modifier 2 S homeolog
Primary source: Xenbase:XB-GENE-969144
Locus tag: XELAEV_18046699mg
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: hsmt3; smt3b; sumo2; smt3h2; sumo-2; sumo2-a; sumo2-b
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Genomic context

Location:: chromosome: 9_10S

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10S	NC_054388.1 (39476895..39485328)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10S	NC_030741.1 (33391322..33399744)

Chromosome 9_10S - NC_054388.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

cyclin E is dynamically and highly conjugated to SUMO2/3 on chromatin, independently of Cdk2 activity and origin activation.
Title: SUMO2/3 modification of cyclin E contributes to the control of replication origin firing.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables protein tag activity	IEA Inferred from Electronic Annotation more info
enables ubiquitin-like protein ligase binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein sumoylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: small ubiquitin-related modifier 2-B

Names: SMT3 suppressor of mif two 3 homolog 2; SUMO-2-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092126.1 → NP_001085595.1 small ubiquitin-related modifier 2-B

See identical proteins and their annotated locations for NP_001085595.1

Status: PROVISIONAL

Source sequence(s)

BC072995

UniProtKB/Swiss-Prot

Q6GPW2

UniProtKB/TrEMBL

A0A974H0U2

Conserved Domains (2) summary

cd01763
Location:7 → 93

Sumo; Small ubiquitin-related modifier (SUMO)

smart00213
Location:18 → 86

UBQ; Ubiquitin homologues