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phf13.L PHD finger protein 13 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443987, updated on 17-Aug-2024

Summary

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Official Symbol
phf13.L
Official Full Name
PHD finger protein 13 L homeolog
Primary source
Xenbase:XB-GENE-17334993
Locus tag
XELAEV_18035798mg
See related
EnsemblRapid:ENSXLAG00005033380
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 7L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (104205729..104217233)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (93845122..93856984)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 48 L homeolog Neighboring gene kelch like family member 21 L homeolog Neighboring gene DnaJ heat shock protein family (Hsp40) member C11 L homeolog Neighboring gene calmodulin binding transcription activator 1 L homeolog Neighboring gene uncharacterized LOC121395592

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80457

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PHD finger protein 13 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092092.1 → NP_001085561.1  PHD finger protein 13 L homeolog

    See identical proteins and their annotated locations for NP_001085561.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072933
    UniProtKB/TrEMBL
    A0A974CHG5, Q6GQ15
    Related
    ENSXLAP00005099847.1, ENSXLAT00005101781.1
    Conserved Domains (1) summary
    cd15632
    Location:254 → 300
    PHD_PHF13; PHD finger found in PHD finger protein 13 (PHF13)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    104205729..104217233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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