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eogt.L EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443983, updated on 18-Sep-2024

Summary

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Official Symbol
eogt.L
Official Full Name
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase L homeolog
Primary source
Xenbase:XB-GENE-994622
Locus tag
XELAEV_18024115mg
See related
EnsemblRapid:ENSXLAG00005006101
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
eogt; aer61; c3orf64
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Genomic context

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See eogt.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (143283975..143323946)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (138044412..138084894)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene ubiquitin like modifier activating enzyme 3 L homeolog Neighboring gene TATA element modulatory factor 1 L homeolog Neighboring gene TAFA chemokine like family member 4 L homeolog Neighboring gene TAFA chemokine like family member 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80419

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein O-acetylglucosaminyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein O-linked glycosylation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase
Names
extracellular O-linked N-acetylglucosamine transferase
NP_001085557.1
XP_041445201.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092088.1 → NP_001085557.1  EGF domain-specific O-linked N-acetylglucosamine transferase precursor

    See identical proteins and their annotated locations for NP_001085557.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072925
    UniProtKB/Swiss-Prot
    Q6GQ23
    UniProtKB/TrEMBL
    A0A974D7V9
    Related
    ENSXLAP00005018259.1, ENSXLAT00005018555.1
    Conserved Domains (1) summary
    pfam04577
    Location:243 → 463
    DUF563; Protein of unknown function (DUF563)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    143283975..143323946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041589267.1 → XP_041445201.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1

    UniProtKB/TrEMBL
    A0A8J1MUS4, A0A974D7V9
    Related
    ENSXLAP00005018291.1, ENSXLAT00005018587.1

RNA

  1. XR_001935153.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GQ23.1 GenPept UniProtKB/Swiss-Prot:Q6GQ23

Gene LinkOut

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