U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rassf3.S Ras association (RalGDS/AF-6) domain family member 3 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443923, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
rassf3.S
Official Full Name
Ras association (RalGDS/AF-6) domain family member 3 S homeolog
Primary source
Xenbase:XB-GENE-865679
Locus tag
XELAEV_18021192mg
See related
EnsemblRapid:ENSXLAG00005020641
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rassf3; rassf5
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rassf3.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (89901078..89933687)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (88066527..88099148)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene glutamate receptor interacting protein 1 S homeolog Neighboring gene TANK binding kinase 1 S homeolog Neighboring gene adipocyte plasma membrane-associated protein-like Neighboring gene U5 spliceosomal RNA Neighboring gene glucosamine (N-acetyl)-6-sulfatase S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC80235

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Ras association (RalGDS/AF-6) domain family member 3 S homeolog
Names
Ras association (RalGDS/AF-6) domain family member 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092028.1 → NP_001085497.1  Ras association (RalGDS/AF-6) domain family member 3 S homeolog

    See identical proteins and their annotated locations for NP_001085497.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072850
    UniProtKB/TrEMBL
    A0A974HRN1, Q6GQ97
    Related
    ENSXLAP00005060527.1, ENSXLAT00005061976.1
    Conserved Domains (2) summary
    pfam16517
    Location:198 → 237
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
    cl00155
    Location:105 → 192
    UBQ; Ubiquitin-like proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    89901078..89933687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.