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dpy30.S dpy-30, histone methyltransferase complex regulatory subunit S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443858, updated on 4-Nov-2024

Summary

Official Symbol
dpy30.S
Official Full Name
dpy-30, histone methyltransferase complex regulatory subunit S homeolog
Primary source
Xenbase:XB-GENE-6251732
Locus tag
XELAEV_18029030mg
See related
EnsemblRapid:ENSXLAG00005008167 AllianceGenome:Xenbase:XB-GENE-6251732
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
dpy30
Summary
Predicted to be located in nucleus. Predicted to be part of Set1C/COMPASS complex. Orthologous to human DPY30 (dpy-30 histone methyltransferase complex regulatory subunit). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See dpy30.S in Genome Data Viewer
Location:
chromosome: 5S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (42399303..42404718)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (42258153..42263605)

Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121394195 Neighboring gene thrombospondin 2 S homeolog Neighboring gene presenilin 2 S homeolog Neighboring gene mediator of cell motility 1 S homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
protein dpy-30 homolog
Names
dpy-30 histone methyltransferase complex regulatory subunit
dpy-30 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091963.1NP_001085432.1  protein dpy-30 homolog

    See identical proteins and their annotated locations for NP_001085432.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072739
    UniProtKB/TrEMBL
    A0A974CQY9, Q6GQK3
    Related
    ENSXLAP00005023479.1, ENSXLAT00005024181.1
    Conserved Domains (1) summary
    pfam05186
    Location:5292
    Dpy-30; Dpy-30 motif

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    42399303..42404718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)