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unc119b.S unc-119 lipid binding chaperone B S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443847, updated on 4-Nov-2024

Summary

Official Symbol
unc119b.S
Official Full Name
unc-119 lipid binding chaperone B S homeolog
Primary source
Xenbase:XB-GENE-981107
Locus tag
XELAEV_18010468mg
See related
EnsemblRapid:ENSXLAG00005014459 AllianceGenome:Xenbase:XB-GENE-981107
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
unc119b; unc119b-B
Summary
Predicted to enable lipid binding activity. Predicted to act upstream of or within lipoprotein transport. Predicted to be located in ciliary transition zone. Orthologous to human UNC119B (unc-119 lipid binding chaperone B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See unc119b.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (140919734..140928685)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (125213076..125222027)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene calcium binding protein 1 S homeolog Neighboring gene malectin S homeolog Neighboring gene uncharacterized LOC121399482 Neighboring gene signal peptide peptidase like 3 S homeolog Neighboring gene uncharacterized LOC121399483 Neighboring gene HNF1 homeobox A S homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC83238

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables lipid binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell projection organization IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cilium assembly IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within lipoprotein transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within lipoprotein transport ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within nervous system development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in ciliary transition zone ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein unc-119 homolog B-B
Names
unc-119 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091952.1NP_001085421.1  protein unc-119 homolog B-B

    See identical proteins and their annotated locations for NP_001085421.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072341
    UniProtKB/Swiss-Prot
    Q6INE2
    UniProtKB/TrEMBL
    A0A974I1C7
    Related
    ENSXLAP00005042309.1, ENSXLAT00005043375.1
    Conserved Domains (1) summary
    pfam05351
    Location:81237
    GMP_PDE_delta; GMP-PDE, delta subunit

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    140919734..140928685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)