tollip.L toll interacting protein L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: tollip.L
Official Full Name: toll interacting protein L homeolog
Primary source: Xenbase:XB-GENE-946212
Locus tag: XELAEV_18022021mg
See related: EnsemblRapid:ENSXLAG00005020738
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: tollip; tollip-a; tollip-b; IL-1RAcPIP
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Genomic context

Location:: chromosome: 4L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4L	NC_054377.1 (16857470..16878912, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4L	NC_030730.1 (16334019..16355607, complement)

Chromosome 4L - NC_054377.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ubiquitin binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within autophagy	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within inflammatory response	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within innate immune response	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within phosphorylation	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: toll-interacting protein B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091951.1 → NP_001085420.1 toll-interacting protein B

See identical proteins and their annotated locations for NP_001085420.1

Status: PROVISIONAL

Source sequence(s)

BC072340

UniProtKB/Swiss-Prot

Q6INE3

UniProtKB/TrEMBL

A0A974HMS6

Related

ENSXLAP00005060845.1, ENSXLAT00005062297.1

Conserved Domains (2) summary

cd04016
Location:52 → 172

C2_Tollip; C2 domain present in Toll-interacting protein (Tollip)

cd14363
Location:225 → 265

CUE_TOLIP; CUE domain found in the C-terminal of toll-interacting protein (Tollip) and similar proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

16857470..16878912 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041589262.1 → XP_041445196.1 toll-interacting protein B isoform X1

UniProtKB/TrEMBL

A0A8J1MUR6

Conserved Domains (2) summary

cd04016
Location:4 → 124

C2_Tollip; C2 domain present in Toll-interacting protein (Tollip)

cd14363
Location:177 → 217

CUE_TOLIP; CUE domain found in the C-terminal of toll-interacting protein (Tollip) and similar proteins