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adck1.L aarF domain containing kinase 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443831, updated on 4-Nov-2024

Summary

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Official Symbol
adck1.L
Official Full Name
aarF domain containing kinase 1 L homeolog
Primary source
Xenbase:XB-GENE-1006950
Locus tag
XELAEV_18039493mg
See related
EnsemblRapid:ENSXLAG00005017338 AllianceGenome:Xenbase:XB-GENE-1006950
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
adck1
Summary
Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in mitochondrion. Orthologous to human ADCK1 (aarF domain containing kinase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See adck1.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (74130615..74157285)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (60647163..60674061)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene alkB homolog 1, histone H2A dioxygenase L homeolog Neighboring gene SRA stem-loop interacting RNA binding protein L homeolog Neighboring gene SNW domain containing 1 L homeolog Neighboring gene neurexin 3 L homeolog Neighboring gene uncharacterized LOC121397068 Neighboring gene uncharacterized LOC121397069

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC82384

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
aarF domain-containing protein kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091936.1 → NP_001085405.1  aarF domain-containing protein kinase 1

    See identical proteins and their annotated locations for NP_001085405.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072263
    UniProtKB/Swiss-Prot
    Q6INL7
    UniProtKB/TrEMBL
    A0A974C7W2
    Related
    ENSXLAP00005051185.1, ENSXLAT00005052347.1
    Conserved Domains (1) summary
    cd13969
    Location:117 → 369
    ADCK1-like; aarF domain containing kinase 1 and similar proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    74130615..74157285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018228863.2 → XP_018084352.2  aarF domain-containing protein kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8J0T8P3, A0A974C7W2
    Related
    ENSXLAP00005051159.1, ENSXLAT00005052321.1
    Conserved Domains (1) summary
    cd13969
    Location:117 → 369
    ADCK1-like; aarF domain containing kinase 1 and similar proteins

  2. XM_041572006.1 → XP_041427940.1  aarF domain-containing protein kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J1LGX6, A0A974C7W2
    Conserved Domains (1) summary
    cd13969
    Location:117 → 369
    ADCK1-like; aarF domain containing kinase 1 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6INL7.1 GenPept UniProtKB/Swiss-Prot:Q6INL7

Gene LinkOut

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