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ubxn1.S UBX domain protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443814, updated on 17-Aug-2024

Summary

Official Symbol
ubxn1.S
Official Full Name
UBX domain protein 1 S homeolog
Primary source
Xenbase:XB-GENE-6251745
Locus tag
XELAEV_18024197mg
See related
EnsemblRapid:ENSXLAG00005008635
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
2b28; saks1; ubxn1; ubxd10; saks1-A; ubxn1-a; ubxn1-b
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Genomic context

Location:
chromosome: 4S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (1448526..1457275, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (1434330..1443508, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene lysine methyltransferase 5B S homeolog Neighboring gene galanin/GMAP prepropeptide S homeolog Neighboring gene uncharacterized LOC108715136 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene uncharacterized LOC108715137 Neighboring gene small nucleolar RNA SNORA57

Genomic regions, transcripts, and products

General protein information

Preferred Names
UBX domain-containing protein 1-A
Names
SAPK substrate protein 1-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091919.1NP_001085388.1  UBX domain-containing protein 1-A

    See identical proteins and their annotated locations for NP_001085388.1

    Status: PROVISIONAL

    Source sequence(s)
    BC106269
    UniProtKB/Swiss-Prot
    Q3B8K6, Q6IP50
    UniProtKB/TrEMBL
    A0A974CXA6
    Related
    ENSXLAP00005025072.1, ENSXLAT00005025781.1
    Conserved Domains (3) summary
    cd01772
    Location:218298
    SAKS1_UBX; SAKS1-like UBX domain
    cd14302
    Location:545
    UBA_UBXN1; UBA domain found in UBX domain-containing protein 1 (UBXN1) and similar proteins
    pfam03879
    Location:126182
    Cgr1; Cgr1 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    1448526..1457275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)