tbca.S tubulin folding cofactor A S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: tbca.S
Official Full Name: tubulin folding cofactor A S homeolog
Primary source: Xenbase:XB-GENE-865972
Locus tag: XELAEV_18010912mg
See related: EnsemblRapid:ENSXLAG00005025889 AllianceGenome:Xenbase:XB-GENE-865972
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: tbca
Summary: Predicted to enable beta-tubulin binding activity. Predicted to act upstream of or within post-chaperonin tubulin folding pathway and tubulin complex assembly. Predicted to be located in cytosol and microtubule. Orthologous to human TBCA (tubulin folding cofactor A). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1S

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (173609879..173631544, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1S	NC_030725.1 (157617308..157639116, complement)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables beta-tubulin binding	IEA Inferred from Electronic Annotation more info
enables tubulin binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within post-chaperonin tubulin folding pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein folding	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within tubulin complex assembly	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in cytosol	IEA Inferred from Electronic Annotation more info
located_in microtubule	IEA Inferred from Electronic Annotation more info
located_in microtubule cytoskeleton	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: tubulin folding cofactor A S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091899.1 → NP_001085368.1 tubulin folding cofactor A S homeolog

See identical proteins and their annotated locations for NP_001085368.1

Status: PROVISIONAL

Source sequence(s)

BC071138

UniProtKB/TrEMBL

A0A974DXA8, Q6DKM6

Related

ENSXLAP00005077025.1, ENSXLAT00005078616.1

Conserved Domains (1) summary

pfam02970
Location:9 → 80

TBCA; Tubulin binding cofactor A

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

173609879..173631544 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)