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aldh3a2.S aldehyde dehydrogenase 3 family member A2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 443767, updated on 18-Sep-2024

Summary

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Official Symbol
aldh3a2.S
Official Full Name
aldehyde dehydrogenase 3 family member A2 S homeolog
Primary source
Xenbase:XB-GENE-942668
Locus tag
XELAEV_18015299mg
See related
EnsemblRapid:ENSXLAG00005003833
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
aldh3a2
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Genomic context

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See aldh3a2.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (85367370..85385901)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (76801228..76819891)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene notchless homolog 1 S homeolog Neighboring gene serine/threonine-protein kinase ULK2-like Neighboring gene multidrug and toxin extrusion protein 2 Neighboring gene unc-45 myosin chaperone B S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC81267

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables 3-chloroallyl aldehyde dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
  
enables aldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular aldehyde metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
aldehyde dehydrogenase 3 family member A2 S homeolog
Names
aldehyde dehydrogenase 3 family, member A2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091872.1 → NP_001085341.1  aldehyde dehydrogenase 3 family member A2 S homeolog

    See identical proteins and their annotated locations for NP_001085341.1

    Status: PROVISIONAL

    Source sequence(s)
    BC071106
    UniProtKB/TrEMBL
    A0A974DHR3, A0A974DQB5, Q6GR28
    Related
    ENSXLAP00005011437.1, ENSXLAT00005011611.1
    Conserved Domains (1) summary
    cd07132
    Location:2 → 444
    ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    85367370..85385901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018248218.2 → XP_018103707.1  aldehyde dehydrogenase 3 family member A2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974DHR3, A0A974DQB5, Q6GR28

  2. XM_041583088.1 → XP_041439022.1  aldehyde dehydrogenase 3 family member A2 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1MBE3, A0A974DQB5
    Related
    ENSXLAP00005011435.1, ENSXLAT00005011609.1
    Conserved Domains (1) summary
    cd07132
    Location:2 → 444
    ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

  3. XM_018248219.2 → XP_018103708.1  aldehyde dehydrogenase 3 family member A2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974DHR3, A0A974DQB5, Q6GR28

  4. XM_018248220.2 → XP_018103709.1  aldehyde dehydrogenase 3 family member A2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974DHR3, A0A974DQB5, Q6GR28

  5. XM_018248223.2 → XP_018103712.1  aldehyde dehydrogenase 3 family member A2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974DHR3, A0A974DQB5, Q6GR28
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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