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VNN1 vanin 1 [ Canis lupus familiaris (dog) ]

Gene ID: 442973, updated on 25-Apr-2024

Summary

Gene symbol
VNN1
Gene description
vanin 1
See related
Ensembl:ENSCAFG00845004723
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

See VNN1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (25767887..25802756, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (26742992..26770993)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (25852617..25901434, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (25690559..25711049, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (25596017..25624588, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) Unplaced Scaffold NW_023332405.1 (302..10439, complement)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene trace amine-associated receptor 2-like Neighboring gene ras-related protein Rab-2A-like Neighboring gene U6 spliceosomal RNA Neighboring gene vanin 3 Neighboring gene pantetheinase Neighboring gene pantetheinase-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

General protein information

Preferred Names
pantetheinase
Names
TIFF66
pantetheine hydrolase
vascular non-inflammatory molecule 1
NP_001003372.1
XP_038381242.1
XP_038509383.1
XP_038509384.1
XP_038509385.1
XP_038509386.1
XP_038509387.1
XP_038509388.1
XP_038509389.1
XP_038509390.1
XP_038509391.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003372.1NP_001003372.1  pantetheinase precursor

    See identical proteins and their annotated locations for NP_001003372.1

    Status: PROVISIONAL

    Source sequence(s)
    U39663
    UniProtKB/Swiss-Prot
    Q9TSX8
    UniProtKB/TrEMBL
    A0A8C0L6M2, A0A8I3MVQ1
    Related
    ENSCAFP00845006661.1, ENSCAFT00845008456.1
    Conserved Domains (2) summary
    cd07567
    Location:26325
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:339484
    Vanin_C; Vanin C-terminal domain

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    25767887..25802756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038653457.1XP_038509385.1  pantetheinase isoform X3

    UniProtKB/TrEMBL
    A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:96395
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:409554
    Vanin_C; Vanin C-terminal domain
  2. XM_038653456.1XP_038509384.1  pantetheinase isoform X2

    UniProtKB/TrEMBL
    A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:111410
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:424569
    Vanin_C; Vanin C-terminal domain
  3. XM_038653455.1XP_038509383.1  pantetheinase isoform X1

    UniProtKB/TrEMBL
    A0A8P0S662
    Conserved Domains (2) summary
    cd07567
    Location:157456
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:470615
    Vanin_C; Vanin C-terminal domain
  4. XM_038653461.1XP_038509389.1  pantetheinase isoform X4

    UniProtKB/Swiss-Prot
    Q9TSX8
    UniProtKB/TrEMBL
    A0A8C0L6M2, A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:26325
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:339484
    Vanin_C; Vanin C-terminal domain
  5. XM_038653458.1XP_038509386.1  pantetheinase isoform X4

    UniProtKB/Swiss-Prot
    Q9TSX8
    UniProtKB/TrEMBL
    A0A8C0L6M2, A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:26325
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:339484
    Vanin_C; Vanin C-terminal domain
  6. XM_038653459.1XP_038509387.1  pantetheinase isoform X4

    UniProtKB/Swiss-Prot
    Q9TSX8
    UniProtKB/TrEMBL
    A0A8C0L6M2, A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:26325
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:339484
    Vanin_C; Vanin C-terminal domain
  7. XM_038653460.1XP_038509388.1  pantetheinase isoform X4

    UniProtKB/Swiss-Prot
    Q9TSX8
    UniProtKB/TrEMBL
    A0A8C0L6M2, A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:26325
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:339484
    Vanin_C; Vanin C-terminal domain
  8. XM_038653462.1XP_038509390.1  pantetheinase isoform X4

    UniProtKB/Swiss-Prot
    Q9TSX8
    UniProtKB/TrEMBL
    A0A8C0L6M2, A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:26325
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:339484
    Vanin_C; Vanin C-terminal domain
  9. XM_038653463.1XP_038509391.1  pantetheinase isoform X4

    UniProtKB/Swiss-Prot
    Q9TSX8
    UniProtKB/TrEMBL
    A0A8C0L6M2, A0A8I3MVQ1
    Conserved Domains (2) summary
    cd07567
    Location:26325
    biotinidase_like; biotinidase and vanins (class 4 nitrilases)
    pfam19018
    Location:339484
    Vanin_C; Vanin C-terminal domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    25690559..25711049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NW_023332405.1 Alternate UMICH_Zoey_3.1

    Range
    302..10439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038525314.1XP_038381242.1  pantetheinase isoform X5

RNA

  1. XR_005352848.1 RNA Sequence

  2. XR_005352849.1 RNA Sequence

  3. XR_005352846.1 RNA Sequence

  4. XR_005352847.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    25596017..25624588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    25852617..25901434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    26742992..26770993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)