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FAM90A5 family with sequence similarity 90 member A5 [ Homo sapiens (human) ]

Gene ID: 441315, updated on 10-Oct-2024

Summary

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Official Symbol
FAM90A5provided by HGNC
Official Full Name
family with sequence similarity 90 member A5provided by HGNC
Primary source
HGNC:HGNC:32253
See related
Ensembl:ENSG00000215373 MIM:613043; AllianceGenome:HGNC:32253
Gene type
protein coding
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM90A5P
Summary
FAM90A5 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]). For background information on the FAM90A gene family, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).[supplied by OMIM, May 2010]
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Genomic context

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See FAM90A5 in Genome Data Viewer
Location:
8p23.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (7287392..7290402)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (7144914..7147924)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901877 Neighboring gene family with sequence similarity 90, member A4 Neighboring gene family with sequence similarity 90 member A13 Neighboring gene family with sequence similarity 90 member A20 Neighboring gene family with sequence similarity 66 member B Neighboring gene defensin beta 109B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. Bosch N, et al. Gene, 2008 Sep 1. PMID 18602769
  2. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. Bosch N, et al. Hum Mol Genet, 2007 Nov 1. PMID 17684299
  3. The BioPlex Network: A Systematic Exploration of the Human Interactome. Huttlin EL, et al. Cell, 2015 Jul 16. PMID 26186194, Free PMC Article
  4. Architecture of the human interactome defines protein communities and disease networks. Huttlin EL, et al. Nature, 2017 May 25. PMID 28514442, Free PMC Article
  5. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Huttlin EL, et al. Cell, 2021 May 27. PMID 33961781, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General protein information

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Preferred Names
protein FAM90A5
Names
family with sequence similarity 90 member A5, pseudogene
putative protein FAM90A5
putative protein FAM90A5P

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423529.1 → NP_001410458.1  protein FAM90A5

    Status: INFERRED

    Source sequence(s)
    AF228730
    UniProtKB/Swiss-Prot
    A8MXJ8
    Related
    ENSP00000514264.1, ENST00000528738.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    7287392..7290402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_032077.2: Suppressed sequence

    Description
    NG_032077.2: This RefSeq was removed because it is now thought that this gene does encode a protein.

  2. NM_001164455.1: Suppressed sequence

    Description
    NM_001164455.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8MXJ8.1 GenPept UniProtKB/Swiss-Prot:A8MXJ8

Gene LinkOut

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Chemical Information
Molecular Biology Databases
Research Materials