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LINC01761 long intergenic non-protein coding RNA 1761 [ Homo sapiens (human) ]

Gene ID: 440594, updated on 17-Sep-2024

Summary

Official Symbol
LINC01761provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1761provided by HGNC
Primary source
HGNC:HGNC:52551
See related
Ensembl:ENSG00000233907 AllianceGenome:HGNC:52551
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01761 in Genome Data Viewer
Location:
1p21.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (95474737..95479356)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (95322770..95327389)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (95940293..95944912)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1650 Neighboring gene uncharacterized LOC107985420 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:95873423-95874034 Neighboring gene NANOG hESC enhancer GRCh37_chr1:95903681-95904235 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:95983694-95984619 Neighboring gene long intergenic non-protein coding RNA 2607 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:96048206-96048858 Neighboring gene uncharacterized LOC101928219 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:96134923-96135424 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:96135425-96135924 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:96207937-96209136 Neighboring gene uncharacterized LOC124904592

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033966.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK056224, AL109756
    Related
    ENST00000424943.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    95474737..95479356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    95322770..95327389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)