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LINC02372 long intergenic non-protein coding RNA 2372 [ Homo sapiens (human) ]

Gene ID: 440117, updated on 10-Oct-2023

Summary

Official Symbol
LINC02372provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2372provided by HGNC
Primary source
HGNC:HGNC:53294
See related
Ensembl:ENSG00000249873 AllianceGenome:HGNC:53294
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 3.7) See more
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Genomic context

See LINC02372 in Genome Data Viewer
Location:
12q24.32
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (126869494..126874690, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (126879819..126885016, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (127354040..127359236, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 944 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:127226104-127227303 Neighboring gene long intergenic non-protein coding RNA 943 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:127256382-127257581 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:127277009-127277172 Neighboring gene transmembrane protein 132B pseudogene Neighboring gene uncharacterized LOC105370061 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr12:127386923-127388122 Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 20

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033970.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC037858, DB046919
    Related
    ENST00000541348.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    126869494..126874690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    126879819..126885016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)