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fd102C forkhead domain 102C [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43843, updated on 2-Nov-2024

Summary

Official Symbol
fd102Cprovided by FlyBase
Official Full Name
forkhead domain 102Cprovided by FlyBase
Primary source
FLYBASE:FBgn0039937
Locus tag
Dmel_CG11152
See related
AllianceGenome:FB:FBgn0039937
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG11152; Dm-FoxQ2; Dmcg11152; Dmel\CG11152; FoxQ2
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Is expressed in several structures, including anlage in statu nascendi; antennal anlage; antennal primordium; central brain anlage; and head epidermis primordium. Orthologous to human FOXJ2 (forkhead box J2) and FOXJ3 (forkhead box J3). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See fd102C in Genome Data Viewer
Location:
102E3-102E3; 4-0 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (836986..844529, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (857612..865155, complement)

Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene Mediator complex subunit 26 Neighboring gene Sox102F Neighboring gene long non-coding RNA:CR45123 Neighboring gene pseudo Neighboring gene Gigyf

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

mobile_element

  • Loc: c839551-839461 mobile_element_type = transposon:INE-1{}2692
  • Loc: c839915-839626 mobile_element_type = transposon:INE-1{}2693
  • Loc: c842695-841742 mobile_element_type = transposon:HB{}2849

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
forkhead domain 102C
Names
CG11152-PA
fd102C-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004353.4 Reference assembly

    Range
    836986..844529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143694.3NP_651951.1  forkhead domain 102C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651951.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V481
    Related
    FBpp0088311
    Conserved Domains (1) summary
    pfam00250
    Location:129213
    Forkhead; Forkhead domain