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side-III sidestep III [ Drosophila melanogaster (fruit fly) ]

Gene ID: 4379844, updated on 2-Nov-2024

Summary

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Official Symbol
side-IIIprovided by FlyBase
Official Full Name
sidestep IIIprovided by FlyBase
Primary source
FLYBASE:FBgn0083949
Locus tag
Dmel_CG34113
See related
AllianceGenome:FB:FBgn0083949
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
34113; CG10989; CG14677; CG14678; CG34113; CT34460; Dmel\CG34113; Dm_3R:9314
Summary
Is expressed in several structures, including adult head; epithelium; presumptive embryonic/larval central nervous system; somatic muscle primordium; and spermatozoon. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

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See side-III in Genome Data Viewer
Location:
83C6-83D1; 3-47.5 cM
Exon count:
18
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5862865..5959555, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1688587..1785277, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46133 Neighboring gene ECSIT Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45761 Neighboring gene long non-coding RNA:CR45762 Neighboring gene long non-coding RNA:CR44925 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Searching for guidance cues: follow the Sidestep trail. Aberle H. Fly (Austin), 2009 Oct-Dec. PMID 19786838
  2. Drosophila Fezf coordinates laminar-specific connectivity through cell-intrinsic and cell-extrinsic mechanisms. Peng J, et al. Elife, 2018 Mar 7. PMID 29513217, Free PMC Article
  3. Host genetic determinants of microbiota-dependent nutrition revealed by genome-wide analysis of Drosophila melanogaster. Dobson AJ, et al. Nat Commun, 2015 Feb 18. PMID 25692519, Free PMC Article
  4. Complex formation of immunoglobulin superfamily molecules Side-IV and Beat-IIb regulates synaptic specificity. Osaka J, et al. Cell Rep, 2024 Feb 27. PMID 38381608
  5. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
sidestep III
Names
CG34113-PO
side-III-PO

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    5862865..5959555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001043216.2 → NP_001036681.1  sidestep III [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036681.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0KIB0
    Conserved Domains (5) summary
    smart00408
    Location:392 → 454
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:391 → 468
    IG_like; Immunoglobulin like
    pfam00047
    Location:190 → 268
    ig; Immunoglobulin domain
    pfam07686
    Location:59 → 166
    V-set; Immunoglobulin V-set domain
    cl11960
    Location:296 → 361
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0KIB0 Q0KIB0
Q0KIB1 Q0KIB1

Gene LinkOut

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