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rgs20 regulator of G protein signaling 20 [ Danio rerio (zebrafish) ]

Gene ID: 436704, updated on 2-Nov-2024

Summary

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Official Symbol
rgs20provided by ZNC
Official Full Name
regulator of G protein signaling 20provided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-128
See related
Ensembl:ENSDARG00000038859 AllianceGenome:ZFIN:ZDB-GENE-040718-128
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:92650
Summary
Orthologous to human RGS20 (regulator of G protein signaling 20). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See rgs20 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (30752523..30784515, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (30771999..30801042, complement)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene si:dkey-94e7.2 Neighboring gene oxygen-regulated protein 1 Neighboring gene transcription elongation factor A (SII), 1 Neighboring gene ATPase H+ transporting V1 subunit H Neighboring gene opioid receptor, kappa 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Concomitant duplications of opioid peptide and receptor genes before the origin of jawed vertebrates. Sundström G, et al. PLoS One, 2010 May 6. PMID 20463905, Free PMC Article
  2. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
  3. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
  4. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
regulator of G-protein signaling 20

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002431.3 → NP_001002431.2  regulator of G-protein signaling 20

    Status: VALIDATED

    Source sequence(s)
    AL929271
    UniProtKB/TrEMBL
    A0A8M2BAP9

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    30752523..30784515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005163427.5 → XP_005163484.1  regulator of G-protein signaling 20 isoform X1

    UniProtKB/TrEMBL
    A0A2R8Q9K9, A0A8M2BAI3
    Related
    ENSDARP00000149943.1, ENSDART00000182523.1
    Conserved Domains (1) summary
    cd08746
    Location:127 → 280
    RGS_RGS20; Regulator of G protein signaling (RGS) domain found in the RGS20 protein

  2. XM_009298568.2 → XP_009296843.1  regulator of G-protein signaling 20 isoform X3

    UniProtKB/TrEMBL
    A0A8M3APS2, B0R0V5
    Related
    ENSDARP00000119773.1, ENSDART00000131230.3
    Conserved Domains (1) summary
    cl02565
    Location:55 → 208
    RGS; Regulator of G protein signaling (RGS) domain superfamily

  3. XM_005163428.5 → XP_005163485.1  regulator of G-protein signaling 20 isoform X2

    See identical proteins and their annotated locations for XP_005163485.1

    UniProtKB/TrEMBL
    A0A8M1N0K5, Q6DH47
    Related
    ENSDARP00000056734.3, ENSDART00000056735.5
    Conserved Domains (1) summary
    cl02565
    Location:55 → 212
    RGS; Regulator of G protein signaling (RGS) domain superfamily
Nucleotide Protein
Heading Accession and Version

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