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Pou5f1-rs4 POU domain, class 5, transcription factor 1, related sequence 4 [ Mus musculus (house mouse) ]

Gene ID: 435755, updated on 17-Aug-2024

Summary

Official Symbol
Pou5f1-rs4provided by MGI
Official Full Name
POU domain, class 5, transcription factor 1, related sequence 4provided by MGI
Primary source
MGI:MGI:101889
See related
Ensembl:ENSMUSG00000105712 AllianceGenome:MGI:101889
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Otf3d; Gm5712; Oct4P1; Otf3-rs4
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Genomic context

See Pou5f1-rs4 in Genome Data Viewer
Location:
3 G3; 3 58.05 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (129227322..129228361)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (129433673..129434712)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene glutamyl aminopeptidase Neighboring gene STARR-positive B cell enhancer mm9_chr3:129124737-129125037 Neighboring gene predicted gene, 35787 Neighboring gene ribosomal protein L7A, pseudogene 7 Neighboring gene STARR-seq mESC enhancer starr_08968 Neighboring gene STARR-seq mESC enhancer starr_08969 Neighboring gene predicted gene, 35986 Neighboring gene ELOVL fatty acid elongase 6

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033594.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC110248
    Related
    ENSMUST00000199748.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    129227322..129228361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)