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LOC4352920 vesicle-associated membrane protein 721 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4352920, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4352920
Gene description
vesicle-associated membrane protein 721
Locus tag
OSNPB_120639800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4352920 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (28157359..28160118)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (27438660..27441822)

Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene HIPL1 protein Neighboring gene beta-glucuronosyltransferase GlcAT14A Neighboring gene uncharacterized LOC4352921 Neighboring gene premnaspirodiene oxygenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-associated membrane protein 721
Names
Os12g0639800

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

    Range
    28157359..28160118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015764394.3 → XP_015619880.1  vesicle-associated membrane protein 721

    UniProtKB/TrEMBL
    A0A0P0YCQ1, Q0ILK4
    Conserved Domains (2) summary
    cd14824
    Location:7 → 121
    Longin; longin domain
    pfam00957
    Location:127 → 195
    Synaptobrevin
Nucleotide Protein
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