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LOC4352891 uncharacterized LOC4352891 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4352891, updated on 1-Aug-2024

Summary

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Gene symbol
LOC4352891
Gene description
uncharacterized LOC4352891
Locus tag
OSNPB_120636400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4352891 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (28004551..28007019, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (27286164..27289642, complement)

Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4352889 Neighboring gene BEL1-like homeodomain protein 7 Neighboring gene uncharacterized LOC9267278 Neighboring gene probable ubiquitin-conjugating enzyme E2 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4352891
Names
Os12g0636400
epoxide hydrolase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

    Range
    28004551..28007019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015762944.3 → XP_015618430.1  uncharacterized protein LOC4352891

    UniProtKB/TrEMBL
    A2ZN48, A3CJS7, Q2QLM4
    Conserved Domains (2) summary
    COG0596
    Location:11 → 314
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    cl21494
    Location:16 → 131
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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