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IntS11 Integrator 11 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43506, updated on 18-Sep-2024

Summary

Official Symbol
IntS11provided by FlyBase
Official Full Name
Integrator 11provided by FlyBase
Primary source
FLYBASE:FBgn0039691
Locus tag
Dmel_CG1972
See related
AllianceGenome:FB:FBgn0039691
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG1972; Dmel\CG1972; dRC-68; Int11
Summary
Predicted to enable endoribonuclease activity. Involved in snRNA 3'-end processing. Predicted to be located in cytoplasm. Predicted to be part of integrator complex. Predicted to be active in nucleus. Is expressed in adult head; organism; and spermatozoon. Orthologous to human INTS11 (integrator complex subunit 11). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See IntS11 in Genome Data Viewer
Location:
99B10-99B10; 3-99 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29745337..29747513)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (25571059..25573235)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Glucosamine-phosphate N-acetyltransferase Neighboring gene WD repeat domain 24 Neighboring gene antisense RNA:CR46109 Neighboring gene ATP synthase, gamma subunit Neighboring gene yata

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA endonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA endonuclease activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in snRNA 3'-end processing IDA
Inferred from Direct Assay
more info
PubMed 
involved_in snRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in snRNA processing ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
part_of integrator complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
integrator 11
Names
CG1972-PA
IntS11-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    29745337..29747513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143464.4NP_651721.1  integrator 11 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651721.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VAH9
    Related
    FBpp0084842
    Conserved Domains (4) summary
    smart01027
    Location:245363
    Beta-Casp; Beta-Casp domain
    COG1236
    Location:4446
    YSH1; RNA processing exonuclease, beta-lactamase fold, Cft2 family [Translation, ribosomal structure and biogenesis]
    pfam07521
    Location:376416
    RMMBL; RNA-metabolizing metallo-beta-lactamase
    cd16291
    Location:6204
    INTS11-like_MBL-fold; Integrator complex subunit 11, and related proteins; MBL-fold metallo-hydrolase domain