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LOC4349749 L-galactono-1,4-lactone dehydrogenase 1, mitochondrial-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4349749, updated on 10-Oct-2024

Summary

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Gene symbol
LOC4349749
Gene description
L-galactono-1,4-lactone dehydrogenase 1, mitochondrial-like
Locus tag
OSNPB_110143500
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
GLDH1; OsJ_32931
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Genomic context

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See LOC4349749 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (2064777..2069249, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (2019763..2024242, complement)

Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene two-component response regulator ORR9 Neighboring gene DNA-directed RNA polymerase V subunit 5A Neighboring gene uncharacterized LOC4349750 Neighboring gene uncharacterized LOC107276511

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The synthesis of strigolactone is affected by endogenous ascorbic acid in transgenic rice for l-galactono-1, 4-lactone dehydrogenase suppressed or overexpressing. Yu L, et al. J Plant Physiol, 2020 Mar-Apr. PMID 32114415
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The synthesis of strigolactone is affected by endogenous ascorbic acid in transgenic rice for l-galactono-1, 4-lactone dehydrogenase suppressed or overexpressing.
    Title: The synthesis of strigolactone is affected by endogenous ascorbic acid in transgenic rice for l-galactono-1, 4-lactone dehydrogenase suppressed or overexpressing.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-arabinono-1,4-lactone oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactonolactone dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-galactono-1,4-lactone dehydrogenase 1, mitochondrial
Names
L-galactonolactone dehydrogenase 1, mitochondrial
LOC_Os11g04740
NP_001410085.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423156.1 → NP_001410085.1  L-galactono-1,4-lactone dehydrogenase 1, mitochondrial

    Status: VALIDATED

    Source sequence(s)
    AK102697, CI133802, CI382556, CI749241, D23947
    UniProtKB/Swiss-Prot
    A0A0P0XYT6, Q0IUP6, Q2RAP0

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

    Range
    2064777..2069249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010737259.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2RAP0.1 GenPept UniProtKB/Swiss-Prot:Q2RAP0

Gene LinkOut

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Molecular Biology Databases
Research Materials