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LOC4346012 uncharacterized LOC4346012 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4346012, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4346012
Gene description
uncharacterized LOC4346012
Locus tag
OSNPB_080511900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0711H09.5
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Genomic context

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See LOC4346012 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (25534547..25538484, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (25388385..25392377, complement)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene plant intracellular Ras-group-related LRR protein 4-like Neighboring gene uncharacterized LOC4346011 Neighboring gene uncharacterized LOC107277027 Neighboring gene heavy metal-associated isoprenylated plant protein 28

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminoacylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4346012
Names
Os08g0511900
aminoacylase-1
putative aminoacylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    25534547..25538484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015795224.3 → XP_015650710.1  uncharacterized protein LOC4346012

    UniProtKB/TrEMBL
    B8BCC4, Q6Z8P2
    Conserved Domains (1) summary
    cd05646
    Location:39 → 442
    M20_AcylaseI_like; M20 Aminoacylase-I like subfamily
Nucleotide Protein
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