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LOC4345962 serine--glyoxylate aminotransferase [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4345962, updated on 18-Sep-2024

Summary

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Gene symbol
LOC4345962
Gene description
serine--glyoxylate aminotransferase
Locus tag
OSNPB_080502700
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1345_D02.38; OJ1506_F01.10
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Genomic context

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See LOC4345962 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (24973650..24976411, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (24828142..24830915, complement)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene fasciclin-like arabinogalactan protein 7 Neighboring gene uncharacterized LOC4345961 Neighboring gene uncharacterized LOC136351439 Neighboring gene uncharacterized LOC4345963 Neighboring gene uncharacterized LOC107276284

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine-pyruvate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine biosynthetic process, by transamination of glyoxylate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine--glyoxylate aminotransferase
Names
Os08g0502700
putative aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    24973650..24976411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015795046.3 → XP_015650532.1  serine--glyoxylate aminotransferase

    UniProtKB/TrEMBL
    A0A0N7KQ37, A0A0P0XHN6, A2YWR6, Q6ZFI6, Q6ZJZ3
    Conserved Domains (1) summary
    PLN02409
    Location:2 → 402
    PLN02409; serine--glyoxylate aminotransaminase
Nucleotide Protein
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