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LOC4345711 protein ecdysoneless homolog [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4345711, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4345711
Gene description
protein ecdysoneless homolog
Locus tag
OSNPB_080447200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0409A07.7
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Genomic context

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See LOC4345711 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (21973643..21979154, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (21835036..21840626, complement)

Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351281 Neighboring gene D-3-phosphoglycerate dehydrogenase 1, chloroplastic Neighboring gene uncharacterized LOC4345712 Neighboring gene uncharacterized LOC4345713

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ecdysoneless homolog
Names
Os08g0447200
P0429B05.28
suppressor-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

    Range
    21973643..21979154 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015794429.3 → XP_015649915.1  protein ecdysoneless homolog

    UniProtKB/TrEMBL
    Q6ZAC7, Q6ZCT6
    Conserved Domains (1) summary
    pfam07093
    Location:59 → 622
    SGT1; SGT1 protein
Nucleotide Protein
Heading Accession and Version

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