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LOC4344179 N6-mAMP deaminase [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4344179, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4344179
Gene description
N6-mAMP deaminase
Locus tag
OSNPB_070661000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4344179 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (28092627..28096019)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (27865006..27868559)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene putative cis-zeatin O-glucosyltransferase Neighboring gene WD repeat-containing protein 55 Neighboring gene uncharacterized LOC4344180 Neighboring gene ubiquitin carboxyl-terminal hydrolase 24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenosine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N6-mAMP deaminase
Names
Os07g0661000
P0496C02.124
adenosine deaminase-like protein
putative adenosine deaminase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    28092627..28096019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015792114.3 → XP_015647600.1  N6-mAMP deaminase

    UniProtKB/TrEMBL
    A2YPL0, Q0D3X5, Q8H3U7
    Conserved Domains (1) summary
    cd00443
    Location:16 → 359
    ADA_AMPD; Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase ...
Nucleotide Protein
Heading Accession and Version

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