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LOC4341698 putative GDP-L-fucose synthase 2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4341698, updated on 16-Jul-2024

Summary

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Gene symbol
LOC4341698
Gene description
putative GDP-L-fucose synthase 2
Locus tag
OSNPB_060652300
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OsJ_22190
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Genomic context

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See LOC4341698 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (27562736..27564051, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (26698725..26702299, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4341696 Neighboring gene heptahelical transmembrane protein ADIPOR2-like Neighboring gene probable GDP-L-fucose synthase 1 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-L-fucose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-sugar biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-L-fucose synthase 2
Names
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase 2
LOC_Os06g44260
OSJNBa0085J13.4
putative GDP-4-keto-6-deoxy-D-mannose-3,5- epimerase-4-reductase
NP_001408602.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001421673.1 → NP_001408602.1  GDP-L-fucose synthase 2

    Status: PROVISIONAL

    Source sequence(s)
    AP014962, AU197262
    UniProtKB/Swiss-Prot
    Q0DAH5, Q67WR5
    UniProtKB/TrEMBL
    A2YFQ0

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    27562736..27564051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q67WR5.1 GenPept UniProtKB/Swiss-Prot:Q67WR5

Gene LinkOut

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Research Materials