U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4340788 UDP-glycosyltransferase CGT [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4340788, updated on 13-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC4340788
Gene description
UDP-glycosyltransferase CGT
Locus tag
OSNPB_060289900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
CGTb; B1026E06.3
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC4340788 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (10767548..10769356, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (10588151..10589943, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase CGT Neighboring gene uncharacterized LOC9269426 Neighboring gene uncharacterized LOC136356977 Neighboring gene uncharacterized LOC9267619

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-glycosyltransferase CGT
Names
2-hydroxyflavanone C-arabinosyltransferase
Os06g0289900
UDP-glucose:2-hydroxyflavanone C-glucosyltransferase
UDP-glycosyltransferase 708A6
putative UDP-glycosyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    10767548..10769356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015786162.3 → XP_015641648.1  UDP-glycosyltransferase CGT

    UniProtKB/TrEMBL
    A0A0N7KLY4, A2YBW4, A3CA23, Q5VME5
    Conserved Domains (1) summary
    cl10013
    Location:21 → 468
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials