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LOC4339247 secretory carrier-associated membrane protein 3-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4339247, updated on 10-Oct-2024

Summary

Gene symbol
LOC4339247
Gene description
secretory carrier-associated membrane protein 3-like
Locus tag
OSNPB_050503000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
SCAMP3; OsJ_19111
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Genomic context

See LOC4339247 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (24877303..24882912, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (24762182..24767785, complement)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex non-core subunit NAF1 Neighboring gene uncharacterized LOC136356519 Neighboring gene uncharacterized LOC107277244 Neighboring gene sulfite reductase [ferredoxin], chloroplastic

Genomic regions, transcripts, and products

General protein information

Preferred Names
secretory carrier-associated membrane protein 3
Names
LOC_Os05g42330
OSJNBa0017K09.16
OSJNBb0048K05.1
Secretory carrier membrane protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001402596.1NP_001389525.1  secretory carrier-associated membrane protein 3

    Status: VALIDATED

    Source sequence(s)
    AK104049, AP014961, AU065315, AU184478, CF327717, CI665184
    UniProtKB/Swiss-Prot
    A3B5L5, B7EVJ1, Q60EA5

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    24877303..24882912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066310278.1XP_066166375.1  secretory carrier-associated membrane protein 3 isoform X1