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LOC4337566 actin-97 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4337566, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4337566
Gene description
actin-97
Locus tag
OSNPB_050106600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4337566 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (362158..364609, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (354153..356645, complement)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene WAT1-related protein At5g64700-like Neighboring gene uncharacterized LOC4337565 Neighboring gene PH, RCC1 and FYVE domains-containing protein 1 Neighboring gene uncharacterized LOC107277823

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
actin-97
Names
Os05g0106600

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    362158..364609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015784519.2 → XP_015640005.1  actin-97

    UniProtKB/TrEMBL
    A0A0P0WH16, B9FK20, Q65XH8
    Conserved Domains (1) summary
    cl17037
    Location:5 → 377
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

  2. XM_015784520.3 → XP_015640006.1  actin-97

    UniProtKB/TrEMBL
    A0A0P0WH16, B9FK20, Q65XH8
    Conserved Domains (1) summary
    cl17037
    Location:5 → 377
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
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