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LOC4335983 mitochondrial phosphate carrier protein 3, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4335983, updated on 10-Oct-2024

Summary

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Gene symbol
LOC4335983
Gene description
mitochondrial phosphate carrier protein 3, mitochondrial
Locus tag
OSNPB_040448800
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4335983 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (22855032..22859994)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (22362228..22367137)

Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene gamma-glutamylcyclotransferase 2-3 Neighboring gene F-box protein FBW2-like Neighboring gene zeaxanthin epoxidase, chloroplastic-like Neighboring gene mitochondrial uncoupling protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial phosphate ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial phosphate carrier protein 3, mitochondrial
Names
Os04g0448800

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419365.1 → NP_001406294.1  mitochondrial phosphate carrier protein 3, mitochondrial

    Status: VALIDATED

    Source sequence(s)
    AK069397, AK105021, AP014960
    UniProtKB/TrEMBL
    Q01J73, Q0JCU8, Q7XV24

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

    Range
    22855032..22859994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015778092.3 → XP_015633578.1  mitochondrial phosphate carrier protein 3, mitochondrial isoform X1

    UniProtKB/TrEMBL
    B8AUD7, B9FFF1
    Conserved Domains (2) summary
    PTZ00169
    Location:170 → 345
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:69 → 155
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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