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LOC4334791 uncharacterized LOC4334791 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4334791, updated on 16-Jul-2024

Summary

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Gene symbol
LOC4334791
Gene description
uncharacterized LOC4334791
Locus tag
OSNPB_030850100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4334791 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (36751286..36756124, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (35772622..35779763, complement)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g15970 Neighboring gene uncharacterized LOC4334790 Neighboring gene 4-hydroxyphenylacetaldehyde oxime monooxygenase Neighboring gene uncharacterized LOC4334793

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphoprotein phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4334791
Names
Os03g0850100

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    36751286..36756124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015775659.2 → XP_015631145.1  uncharacterized protein LOC4334791 isoform X2

    Conserved Domains (1) summary
    pfam03031
    Location:173 → 333
    NIF; NLI interacting factor-like phosphatase

  2. XM_015775656.3 → XP_015631142.1  uncharacterized protein LOC4334791 isoform X1

    UniProtKB/TrEMBL
    B8ANP2, Q0DLS1, Q7G7C1, Q84K83
    Conserved Domains (1) summary
    pfam03031
    Location:261 → 421
    NIF; NLI interacting factor-like phosphatase
Nucleotide Protein
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