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LOC4334757 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4334757, updated on 1-Aug-2024

Summary

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Gene symbol
LOC4334757
Gene description
serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
Locus tag
OSNPB_030844500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
B'zeta
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Genomic context

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See LOC4334757 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (36471960..36476562)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (35498832..35503553)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene PTI1-like tyrosine-protein kinase 1 Neighboring gene exosome complex component RRP41-like Neighboring gene GDSL esterase/lipase At3g48460 Neighboring gene ALBINO3-like protein 1, chloroplastic Neighboring gene uncharacterized LOC4334760

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of protein phosphatase type 2A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform
Names
Os03g0844500
putative protein phosphatase 2A B'zeta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    36471960..36476562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066308835.1 → XP_066164932.1  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform

    UniProtKB/TrEMBL
    A0A0P0W5X9, B8AN84, Q0DLV3, Q75LC7, Q8L6I6

  2. XM_015776775.3 → XP_015632261.1  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform

    UniProtKB/TrEMBL
    A0A0P0W5X9, B8AN84, Q0DLV3, Q75LC7, Q8L6I6
    Conserved Domains (2) summary
    pfam01603
    Location:91 → 494
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    cl27532
    Location:37 → 103
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)

  3. XM_015776776.3 → XP_015632262.1  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform

    UniProtKB/TrEMBL
    A0A0P0W5X9, B8AN84, Q0DLV3, Q75LC7, Q8L6I6
    Conserved Domains (2) summary
    pfam01603
    Location:91 → 494
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    cl27532
    Location:37 → 103
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)

  4. XM_015776774.3 → XP_015632260.1  serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform

    UniProtKB/TrEMBL
    A0A0P0W5X9, B8AN84, Q0DLV3, Q75LC7, Q8L6I6
    Conserved Domains (2) summary
    pfam01603
    Location:91 → 494
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    cl27532
    Location:37 → 103
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
Nucleotide Protein
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