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LOC4333715 probable galacturonosyltransferase-like 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4333715, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4333715
Gene description
probable galacturonosyltransferase-like 1
Locus tag
OSNPB_030678800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4333715 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (27750828..27752099)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (26878120..26879413)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase BLUS1 Neighboring gene uncharacterized LOC4333714 Neighboring gene uncharacterized LOC107276611 Neighboring gene uncharacterized LOC4333716

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase-like 1
Names
Os03g0678800

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    27750828..27752099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015773839.3 → XP_015629325.1  probable galacturonosyltransferase-like 1

    UniProtKB/TrEMBL
    B9FAJ9, Q10F74, Q84SY6
    Conserved Domains (1) summary
    pfam01501
    Location:67 → 334
    Glyco_transf_8; Glycosyl transferase family 8
Nucleotide Protein
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