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LOC4332542 uncharacterized mitochondrial carrier C8C9.12c [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4332542, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4332542
Gene description
uncharacterized mitochondrial carrier C8C9.12c
Locus tag
OSNPB_030296800
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4332542 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (10438993..10441811)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (10388030..10390924)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene egg cell-secreted protein 1.3 Neighboring gene uncharacterized LOC4332541 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene uncharacterized protein At5g01610

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The rice mitochondrial iron transporter is essential for plant growth. Bashir K, et al. Nat Commun, 2011. PMID 21610725, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The rice mitochondrial iron transporter (Os03g0296800) is essential for plant growth.
    Title: The rice mitochondrial iron transporter is essential for plant growth.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ferrous iron transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron import into the mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized mitochondrial carrier C8C9.12c
Names
Os03g0296800

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    10438993..10441811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015776580.3 → XP_015632066.1  uncharacterized mitochondrial carrier C8C9.12c

    UniProtKB/TrEMBL
    B8AM08, Q0DSP1, Q10MS8
    Conserved Domains (1) summary
    pfam00153
    Location:133 → 223
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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