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LOC4331562 large ribosomal subunit protein uL14 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331562, updated on 13-Jul-2024

Summary

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Gene symbol
LOC4331562
Gene description
large ribosomal subunit protein uL14
Locus tag
OSNPB_030139100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4331562 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (2150855..2153526)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (2142625..2145410)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene uncharacterized LOC9271320 Neighboring gene uncharacterized LOC4331563 Neighboring gene uncharacterized LOC136355759 Neighboring gene uncharacterized LOC9271987

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables large ribosomal subunit rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein uL14
Names
Os03g0139100

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    2150855..2153526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015775306.3 → XP_015630792.1  large ribosomal subunit protein uL14

    UniProtKB/TrEMBL
    A0A0N7KGJ7, A0A0P0XVK3, A2Z8B9, Q6K8P0, Q7XDL5, Q9AV77
    Conserved Domains (1) summary
    PTZ00054
    Location:2 → 140
    PTZ00054; 60S ribosomal protein L23; Provisional
Nucleotide Protein
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