U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4331385 uncharacterized LOC4331385 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4331385, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC4331385
Gene description
uncharacterized LOC4331385
Locus tag
OSNPB_030114300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC4331385 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (807589..816819)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (800032..809300)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4331383 Neighboring gene uncharacterized LOC4331384 Neighboring gene AAA-ATPase At2g46620 Neighboring gene uncharacterized LOC9272533

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC4331385
Names
Os03g0114300

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    807589..816819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066308537.1 → XP_066164634.1  uncharacterized protein LOC4331385 isoform X3

  2. XM_015776077.2 → XP_015631563.1  uncharacterized protein LOC4331385 isoform X1

    UniProtKB/TrEMBL
    B8ALY6, B9FAF6, Q8GZX1
    Conserved Domains (2) summary
    smart00220
    Location:32 → 293
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd06610
    Location:31 → 293
    STKc_OSR1_SPAK; Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

  3. XM_015776078.2 → XP_015631564.1  uncharacterized protein LOC4331385 isoform X2

    UniProtKB/TrEMBL
    Q0DVT1, Q10SQ6, Q8GZX1
    Conserved Domains (1) summary
    cd06610
    Location:31 → 293
    STKc_OSR1_SPAK; Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

RNA

  1. XR_010739983.1 RNA Sequence

  2. XR_010739982.1 RNA Sequence

  3. XR_010739984.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials