U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4330482 histidinol-phosphate aminotransferase, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330482, updated on 12-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC4330482
Gene description
histidinol-phosphate aminotransferase, chloroplastic
Locus tag
OSNPB_020709200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
49D11.4
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC4330482 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (29816296..29819894, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (29324708..29328626, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene RNA exonuclease 4 Neighboring gene uncharacterized LOC4330481 Neighboring gene uncharacterized LOC4330483 Neighboring gene calpain-type cysteine protease ADL1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histidinol-phosphate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-histidine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
histidinol-phosphate aminotransferase, chloroplastic
Names
OSJNBb0060O16.41
Os02g0709200
putative histidinol phosphate aminotransferase
putative histidinol-phosphate transaminase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    29816296..29819894 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767604.3 → XP_015623090.1  histidinol-phosphate aminotransferase, chloroplastic

    UniProtKB/TrEMBL
    A0A0P0VNN7, B9F221, Q0DY86, Q6YV10
    Conserved Domains (2) summary
    PLN03026
    Location:58 → 424
    PLN03026; histidinol-phosphate aminotransferase; Provisional
    cl18945
    Location:65 → 423
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials