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LOC4330237 tripeptidyl-peptidase 2-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330237, updated on 10-Oct-2024

Summary

Gene symbol
LOC4330237
Gene description
tripeptidyl-peptidase 2-like
Locus tag
OSNPB_020664300
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
TPP2; TPPII
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Genomic context

See LOC4330237 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (27439299..27456694)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (26952861..26970252)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene probable phospholipid hydroperoxide glutathione peroxidase Neighboring gene UDP-glucose:glycoprotein glucosyltransferase Neighboring gene uncharacterized LOC9272164 Neighboring gene uncharacterized LOC9267931

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables tripeptidyl-peptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
tripeptidyl-peptidase 2
Names
LOC_Os02g44520
P0461B08.4-1
P0461B08.4-2
Tripeptidyl-peptidase II
putative tripeptidyl peptidase II
NP_001403745.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001416816.1NP_001403745.1  tripeptidyl-peptidase 2

    Status: VALIDATED

    Source sequence(s)
    AK066478, AK067099, AK103515, CI308890, CI322886, CI576016, CI576733
    UniProtKB/Swiss-Prot
    A0A0P0VMN4, Q6ESI6, Q6ESI7

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    27439299..27456694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)