U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4329034 large ribosomal subunit protein eL27x [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4329034, updated on 12-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC4329034
Gene description
large ribosomal subunit protein eL27x
Locus tag
OSNPB_020284600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1115_D03.9
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC4329034 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (10729892..10730555, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (10700784..10701529, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355411 Neighboring gene protein FAR1-RELATED SEQUENCE 5 Neighboring gene uncharacterized LOC4329035 Neighboring gene salt stress root protein RS1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
large ribosomal subunit protein eL27x
Names
60S ribosomal protein L27-3
OSJNBa0018M09.22
Os02g0284600
putative 60S ribosomal protein L27

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    10729892..10730555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015772129.3 → XP_015627615.1  large ribosomal subunit protein eL27x

    UniProtKB/TrEMBL
    A2X3I0, A3A5L7, Q6K4T1, Q6KA70
    Conserved Domains (2) summary
    cd06090
    Location:6 → 88
    KOW_RPL27; KOW motif of eukaryotic Ribosomal Protein L27
    pfam01777
    Location:52 → 137
    Ribosomal_L27e; Ribosomal L27e protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials