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LOC4326521 succinate dehydrogenase subunit 4, mitochondrial-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326521, updated on 10-Oct-2024

Summary

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Gene symbol
LOC4326521
Gene description
succinate dehydrogenase subunit 4, mitochondrial-like
Locus tag
OSNPB_010935900
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
SDH4
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Genomic context

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See LOC4326521 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (41730203..41732361, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (41085909..41088163, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene cytochrome c1-2, heme protein, mitochondrial Neighboring gene probable leucine-rich repeat receptor-like protein kinase At5g49770 Neighboring gene putative glutaredoxin-C2 Neighboring gene receptor-like cytoplasmic kinase 185

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase subunit 4, mitochondrial
Names
LOC_Os01g70980
P0492G09.31
putative succinate dehydrogenase subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001398019.1 → NP_001384948.1  succinate dehydrogenase subunit 4, mitochondrial

    Status: VALIDATED

    Source sequence(s)
    AU100987, CI030949, CI770243
    UniProtKB/Swiss-Prot
    A0A0N7KED3, Q942X4, Q946Y2
    UniProtKB/TrEMBL
    B8A8U0

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    41730203..41732361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q942X4.1 GenPept UniProtKB/Swiss-Prot:Q942X4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials