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LOC4326479 poly [ADP-ribose] polymerase 2-A [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326479, updated on 18-Sep-2024

Summary

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Gene symbol
LOC4326479
Gene description
poly [ADP-ribose] polymerase 2-A
Locus tag
OSNPB_010351200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
PARP2-A; PARP-2-A; ADPRT-2-A
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Genomic context

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See LOC4326479 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (14092157..14099279)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (14047770..14054908)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355281 Neighboring gene poly [ADP-ribose] polymerase 2-B Neighboring gene exocyst complex component SEC15B Neighboring gene protein SRG1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein poly-ADP-ribosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly [ADP-ribose] polymerase 2-A
Names
B1051E10.55
LOC_Os01g24940
NAD(+) ADP-ribosyltransferase 2-A
P0463A02.25
Poly[ADP-ribose] synthase 2-A
protein ADP-ribosyltransferase PARP2
putative poly(ADP-ribose) polymerase
NP_001384929.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001398000.1 → NP_001384929.1  poly [ADP-ribose] polymerase 2-A

    Status: PROVISIONAL

    Source sequence(s)
    AP014957, CI077948
    Conserved Domains (1) summary
    PLN03124
    Location:1 → 652
    PLN03124; poly [ADP-ribose] polymerase; Provisional

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    14092157..14099279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5Z8Q9.2 GenPept UniProtKB/Swiss-Prot:Q5Z8Q9

Gene LinkOut

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Molecular Biology Databases
Research Materials